Base de Conocimiento Técnico - Contribuciones del usuario [es]

Proyecto Tiburones

2019-09-12T23:32:01Z

Lidefi87: /* Supporting files - Shark tagging */

The Sharks Project repository for all protocols and supporting documents needed to process and/or analyse data.

==Protocols==
*[[medio:ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]
*[[Análisis estéreo videos - DOVs and BRUVs]]
*[[Renewing EventMeasure licenses]]

==Supporting files - stereo-video analysis==
*[[medio:DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[medio:NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R Código resumen de datos DOVs / Summarising DOVs data script]

==Supporting files - Shark tagging==
*[[medio:SlewiniSamplingTaggingDarwin.xlsx | Hammerhead tagging and sampling log]]

Proyecto Tiburones

2019-09-12T23:31:50Z

Lidefi87: /* Supporting files - Shark tagging */

Proyecto Tiburones

2019-09-12T23:31:38Z

Lidefi87: /* Archivos de soporte - Marcaje de tiburones */

Proyecto Tiburones

2019-09-12T23:31:15Z

Lidefi87: /* Archivos de soporte - Análisis estéreo-videos */

The Sharks Project repository for all protocols and supporting documents needed to process and/or analyse data.

==Protocols==
*[[medio:ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]
*[[Análisis estéreo videos - DOVs and BRUVs]]
*[[Renewing EventMeasure licenses]]

==Supporting files - stereo-video analysis==
*[[medio:DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[medio:NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R Código resumen de datos DOVs / Summarising DOVs data script]

==Archivos de soporte - Marcaje de tiburones==
*[[medio:SlewiniSamplingTaggingDarwin.xlsx |Formato marcaje tiburones martillo / Hammerheads tagging and sampling log]]

Proyecto Tiburones

2019-09-12T23:30:48Z

Lidefi87: /* Protocolos de trabajo */

The Sharks Project repository for all protocols and supporting documents needed to process and/or analyse data.

==Protocols==
*[[medio:ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]
*[[Análisis estéreo videos - DOVs and BRUVs]]
*[[Renewing EventMeasure licenses]]

==Archivos de soporte - Análisis estéreo-videos==
*[[medio:DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[medio:NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R Código resumen de datos DOVs / Summarising DOVs data script]

==Archivos de soporte - Marcaje de tiburones==
*[[medio:SlewiniSamplingTaggingDarwin.xlsx |Formato marcaje tiburones martillo / Hammerheads tagging and sampling log]]

Renewing EventMeasure licenses

2019-09-12T23:29:34Z

Lidefi87:

SeaGIS licence keys expire yearly on February 1st, which means we need to arrange for their renewal by mid-January. We have two types of SeaGIS licences: USB keys and Software Keys. The instructions on how to renew them are described below.

# '''USB license keys'''
#*Contact the software distributor advising them that SeaGIS licence is about to expire and needs renewing. Let them know how many USB license keys need renewing. They should send back a V2C file attached to their reply, which will be used update the USB license keys. Download this file into a computer that has EM and CAL already installed.
#*Once the file is saved in the computer you will use to update the license keys, insert the USB license key.
#*Open a ''Windows file explorer'' window. This is the window you usually use to find files in your computer. You can open a new window by right clicking the ''Start'' button and clicking on ''File Explorer''.
#*In this window, you need to navigate to the '''SeaGIS''' folder in your Program Files (e.g., ''C:\Program Files (x86)\SeaGIS\''). Inside this directory, you will find one folder for every SeaGIS program installed in your computer (e.g., CAL and EventMeasure). You will need to update the license for each one of them.
#*Inside the package folder, open the '''Executables''' folder, find the file ''hasprus.exe'', and double click on it to open the program. Example directory: ''C:\Program Files (x86)\SeaGIS\CAL\Executables''.
#*When Hasprus opens, select the ''Apply License Update'' tab and locate the V2C file that you previously saved in the computer by clicking the ellipsis (…) button. Click the ''Apply Update'' button and you will be asked to save a file, this is not necessary, so click ''Cancel''.
#*Open the SeaGIS software package that you just updated the licence for, and check the license has been updated. This will usually mean that you are now able to open the program.
#*Once you have verified the license is updated, you will need to do the same for every SeaGIS program installed in your computer.
#:
# '''Software keys'''
#*Contact the software distributor advising them that SeaGIS license is about to expire and needs renewing. Let them know how many software licence keys need renewing. They should reply to you with two keys and an options code. They should look something similar to the ones below:
#**Key 1: 06586CA904BB580714553C0
#**Key 2: F98FC64D44F6BD0728A04E5F0B8EA0
#**Options: 041C08043288041820041B58
#*In the computer using the Software License Key, open EventMeasure. A window with an ''Error with the license'' message will pop-up and it will ask you for a new key. Click ''Yes'', enter Key 1 when prompted and click ''Ok''. You will be prompted to enter Key 2 and once you enter it, EM will open.
#*Once the program has finished loading, select ''Options'' in the main menu and enter the Options code.

Renewing EventMeasure licenses

2019-09-12T23:26:29Z

Lidefi87:

SeaGIS licence keys expire yearly on February 1st, which means we need to arrange for their renewal by mid-January. We have two types of SeaGIS licences: USB keys and Software Keys. The instructions on how to renew them are described below.

# '''USB license keys'''
#*Contact the software distributor advising them that SeaGIS licence is about to expire and needs renewing. Let them know how many USB license keys need renewing. They should send back a V2C file attached to their reply, which will be used update the USB license keys. Download this file into a computer that has EM and CAL already installed.
#*Once the file is saved in the computer you will use to update the license keys, insert the USB license key.
#*Open a ''Windows file explorer'' window. This is the window you usually use to find files in your computer. You can open a new window by right clicking the ''Start'' button and clicking on ''File Explorer''.
#*In this window, you need to navigate to the '''SeaGIS''' folder in your Program Files (e.g., ''C:\Program Files (x86)\SeaGIS\''). Inside this directory, you will find one folder for every SeaGIS program installed in your computer (e.g., CAL and EventMeasure). You will need to update the license for each one of them.
#*Inside the package folder, open the '''Executables''' folder, find the file ''hasprus.exe'', and double click on it to open the program. Example directory: ''C:\Program Files (x86)\SeaGIS\CAL\Executables''.
#*When Hasprus opens, select the ''Apply License Update'' tab and locate the V2C file that you previously saved in the computer by clicking the ellipsis (…) button. Click the ''Apply Update'' button and you will be asked to save a file, this is not necessary, so click ''Cancel''.
#*Open the SeaGIS software package that you just updated the licence for, and check the license has been updated. This will usually mean that you are now able to open the program.
#*Once you have verified the license is updated, you will need to do the same for every SeaGIS program installed in your computer.

# '''Software keys'''
#*Contact the software distributor advising them that SeaGIS license is about to expire and needs renewing. Let them know how many software licence keys need renewing. They should reply to you with two keys and an options code. They should look something similar to the ones below:
#**Key 1: 06586CA904BB580714553C0
#**Key 2: F98FC64D44F6BD0728A04E5F0B8EA0
#**Options: 041C08043288041820041B58
#*In the computer using the Software License Key, open EventMeasure. A window with an ''Error with the license'' message will pop-up and it will ask you for a new key. Click ''Yes'', enter Key 1 when prompted and click ''Ok''. You will be prompted to enter Key 2 and once you enter it, EM will open.
#*Once the program has finished loading, select ''Options'' in the main menu and enter the Options code.

Renewing EventMeasure licenses

2019-09-12T23:18:18Z

Lidefi87:

Renewing EventMeasure licenses

2019-09-12T23:17:15Z

Lidefi87: Página creada con «SeaGIS licence keys expire yearly on February 1st, which means we need to arrange for their renewal by mid-January. We have two types of SeaGIS licences: USB keys and Softw...»

Proyecto Tiburones

2019-09-12T23:14:07Z

Lidefi87:

The Sharks Project repository for all protocols and supporting documents needed to process and/or analyse data.

==Protocolos de trabajo==
*[[medio:ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]
*[[Análisis estéreo videos - DOVs and BRUVs]]
*[[Renewing EventMeasure licenses]]

==Archivos de soporte - Análisis estéreo-videos==
*[[medio:DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[medio:NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R Código resumen de datos DOVs / Summarising DOVs data script]

==Archivos de soporte - Marcaje de tiburones==
*[[medio:SlewiniSamplingTaggingDarwin.xlsx |Formato marcaje tiburones martillo / Hammerheads tagging and sampling log]]

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T23:11:58Z

Lidefi87: /* Introductory points for stereo-video analysis */

== Introductory points for stereo-video analysis ==
*Our ongoing stereo-DOV campaign at Darwin and Wolf islands cover a total of 15 sites across these two islands: 7 sites at Darwin and 8 sites at Wolf island. Figure 1 shows the location, site names and coordinates for the starting point for each dive.

[[Archivo:Fig1a_Darwin.tif]]
[[Archivo:Fig1b_Wolf.tif]]
Figure 1 – Location of stereo-BRUVs deployments (diamonds) and stereo-DOVs transects (lines) at Darwin (top) and Wolf (bottom) islands. Coordinates given in decimal degrees (CRS: WGS84).

*Before training is started, every analyst must have a Google Drive account. Working spreadsheets will be shared through this platform to ensure all parties analysing the same stereo-DOVs campaign have access to the same document. This will prevent the creation of multiple versions of the same document.
*Ensure camera systems have been calibrated prior to the video analysis (See Section 4 - Calibration of camera systems for more information). If cameras were changed in a stereo-DOV system, it will be necessary to recalibrate the system before any videos can be analysed.
*Video analysts must be thoroughly trained by a senior team member in the correct use of EventMeasure and/or fish identification. After the initial training period, the new video analyst will have two (2) weeks to examine a ‘testing video’ on their own. This ‘testing video’ is any video that has been previously analysed and checked for accuracy by a senior member of our team. To be deemed competent, analysts must obtain a minimum of 90% accuracy in the identification of species present in the ‘testing video’.
*After training is completed, it is expected the analysis will take between 3-4 days per video.
*For stereo-DOVs, fish are divided into four (4) categories, each is treated slightly differently during the analysis phase. This will be explained with more detail under Section 5 - Analysing stereo-DOV.
**Spp of interest - large carnivorous species
**Spp of NO interest - small herbivorous species
**Schools - aggregations of more than 20 individuals of the same species
**Gringos (Paranthias colonus)
*Every video must be analysed by at least two analysts, one will identify the fish and a second person will measure individual fishes and confirm fish identifications.
*There is one working spreadsheet called DOVs Progress Sheet for each sampling campaign (Figure 2). Notice the columns in the spreadsheet have been colour coded to match this protocol. You will notice that you will not be able to edit some sheets and/or columns in this spreadsheet. This is because there is either a formula that automatically calculates values or there is reference information that will remain the same throughout this study. The DOVs Progress Sheet has six (6) sheets or tabs:
##FieldDB – sheet containing information gathered while on the field;
##progr1-Interest-School-Gring – it contains information about the overall progress for the analysis of species of interest, schooling fish, and gringos;
##progr2- non Interest – it only contains information for species of no interest to this project;
##Disease sharks – sheet used to keep track of the sites where hammerheads show signs of having a skin disease (Figure 3).
##spp – this sheet contains two lists:
###INTEREST SPP – list containing the fish families of interest for this study
###NON INTEREST – list containing the fish families that are not of interest to this project
###Max Lngths for Cmm Sp – maximum lengths for the most common species found at Darwin and Wolf islands. This information is useful for the Quality Control (see Quality control section).
*Videos, calibration (CAL) files, spreadsheets, manuals and all relevant documentation will be available on the server. If you do not have access to the server, ask the team leader.

[[Archivo:Fig2.jpg | 1200px | Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.]]
Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.

[[Archivo:Fig3.tif]]
Figure 3 – Examples of skin disease in hammerhead sharks that must be recorded in the ‘Disease sharks’ tab of the Progress Sheet.

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T23:09:18Z

Lidefi87: /* Introductory points for stereo-video analysis */

== Introductory points for stereo-video analysis ==
Our ongoing stereo-DOV campaign at Darwin and Wolf islands cover a total of 15 sites across these two islands: 7 sites at Darwin and 8 sites at Wolf island. Figure 1 shows the location, site names and coordinates for the starting point for each dive.

[[Archivo:Fig1a_Darwin.tif]]
[[Archivo:Fig1b_Wolf.tif]]
Figure 1 – Location of stereo-BRUVs deployments (diamonds) and stereo-DOVs transects (lines) at Darwin (top) and Wolf (bottom) islands. Coordinates given in decimal degrees (CRS: WGS84).

Before training is started, every analyst must have a Google Drive account. Working spreadsheets will be shared through this platform to ensure all parties analysing the same stereo-DOVs campaign have access to the same document. This will prevent the creation of multiple versions of the same document.
Ensure camera systems have been calibrated prior to the video analysis (See Section 4 - Calibration of camera systems for more information). If cameras were changed in a stereo-DOV system, it will be necessary to recalibrate the system before any videos can be analysed.
• Video analysts must be thoroughly trained by a senior team member in the correct use of EventMeasure and/or fish identification. After the initial training period, the new video analyst will have two (2) weeks to examine a ‘testing video’ on their own. This ‘testing video’ is any video that has been previously analysed and checked for accuracy by a senior member of our team. To be deemed competent, analysts must obtain a minimum of 90% accuracy in the identification of species present in the ‘testing video’.
• After training is completed, it is expected the analysis will take between 3-4 days per video.
• For stereo-DOVs, fish are divided into four (4) categories, each is treated slightly differently during the analysis phase. This will be explained with more detail under Section 5 - Analysing stereo-DOV.
o Spp of interest - large carnivorous species
o Spp of NO interest - small herbivorous species
o Schools - aggregations of more than 20 individuals of the same species
o Gringos (Paranthias colonus)
• Every video must be analysed by at least two analysts, one will identify the fish and a second person will measure individual fishes and confirm fish identifications.
• There is one working spreadsheet called DOVs Progress Sheet for each sampling campaign (Figure 2). Notice the columns in the spreadsheet have been colour coded to match this protocol. You will notice that you will not be able to edit some sheets and/or columns in this spreadsheet. This is because there is either a formula that automatically calculates values or there is reference information that will remain the same throughout this study. The DOVs Progress Sheet has six (6) sheets or tabs:
1. FieldDB – sheet containing information gathered while on the field;
2. progr1-Interest-School-Gring – it contains information about the overall progress for the analysis of species of interest, schooling fish, and gringos;
3. progr2- non Interest – it only contains information for species of no interest to this project;
4. Disease sharks – sheet used to keep track of the sites where hammerheads show signs of having a skin disease (Figure 3).
5. spp – this sheet contains two lists:
a. INTEREST SPP – list containing the fish families of interest for this study
b. NON INTEREST – list containing the fish families that are not of interest to this project
6. Max Lngths for Cmm Sp – maximum lengths for the most common species found at Darwin and Wolf islands. This information is useful for the Quality Control (see Quality control section).
• Videos, calibration (CAL) files, spreadsheets, manuals and all relevant documentation will be available on the server. If you do not have access to the server, ask the team leader.

[[Archivo:Fig2.jpg | 1200px | Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.]]
Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.

[[Archivo:Fig3.tif]]
Figure 3 – Examples of skin disease in hammerhead sharks that must be recorded in the ‘Disease sharks’ tab of the Progress Sheet.

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T23:08:59Z

Lidefi87: /* Introductory points for stereo-video analysis */

== Introductory points for stereo-video analysis ==
Our ongoing stereo-DOV campaign at Darwin and Wolf islands cover a total of 15 sites across these two islands: 7 sites at Darwin and 8 sites at Wolf island. Figure 1 shows the location, site names and coordinates for the starting point for each dive.

[[Archivo:Fig1a_Darwin.tif]]
[[Archivo:Fig1b_Wolf.tif]]
Figure 1 – Location of stereo-BRUVs deployments (diamonds) and stereo-DOVs transects (lines) at Darwin (top) and Wolf (bottom) islands. Coordinates given in decimal degrees (CRS: WGS84).

Before training is started, every analyst must have a Google Drive account. Working spreadsheets will be shared through this platform to ensure all parties analysing the same stereo-DOVs campaign have access to the same document. This will prevent the creation of multiple versions of the same document.
Ensure camera systems have been calibrated prior to the video analysis (See Section 4 - Calibration of camera systems for more information). If cameras were changed in a stereo-DOV system, it will be necessary to recalibrate the system before any videos can be analysed.
• Video analysts must be thoroughly trained by a senior team member in the correct use of EventMeasure and/or fish identification. After the initial training period, the new video analyst will have two (2) weeks to examine a ‘testing video’ on their own. This ‘testing video’ is any video that has been previously analysed and checked for accuracy by a senior member of our team. To be deemed competent, analysts must obtain a minimum of 90% accuracy in the identification of species present in the ‘testing video’.
• After training is completed, it is expected the analysis will take between 3-4 days per video.
• For stereo-DOVs, fish are divided into four (4) categories, each is treated slightly differently during the analysis phase. This will be explained with more detail under Section 5 - Analysing stereo-DOV.
o Spp of interest - large carnivorous species
o Spp of NO interest - small herbivorous species
o Schools - aggregations of more than 20 individuals of the same species
o Gringos (Paranthias colonus)
• Every video must be analysed by at least two analysts, one will identify the fish and a second person will measure individual fishes and confirm fish identifications.
• There is one working spreadsheet called DOVs Progress Sheet for each sampling campaign (Figure 2). Notice the columns in the spreadsheet have been colour coded to match this protocol. You will notice that you will not be able to edit some sheets and/or columns in this spreadsheet. This is because there is either a formula that automatically calculates values or there is reference information that will remain the same throughout this study. The DOVs Progress Sheet has six (6) sheets or tabs:
1. FieldDB – sheet containing information gathered while on the field;
2. progr1-Interest-School-Gring – it contains information about the overall progress for the analysis of species of interest, schooling fish, and gringos;
3. progr2- non Interest – it only contains information for species of no interest to this project;
4. Disease sharks – sheet used to keep track of the sites where hammerheads show signs of having a skin disease (Figure 3).
5. spp – this sheet contains two lists:
a. INTEREST SPP – list containing the fish families of interest for this study
b. NON INTEREST – list containing the fish families that are not of interest to this project
6. Max Lngths for Cmm Sp – maximum lengths for the most common species found at Darwin and Wolf islands. This information is useful for the Quality Control (see Quality control section).
• Videos, calibration (CAL) files, spreadsheets, manuals and all relevant documentation will be available on the server. If you do not have access to the server, ask the team leader.

[[Archivo:Fig2.jpg | 800px | Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.]]
Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.

[[Archivo:Fig3.tif]]
Figure 3 – Examples of skin disease in hammerhead sharks that must be recorded in the ‘Disease sharks’ tab of the Progress Sheet.

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T23:08:43Z

Lidefi87: /* Introductory points for stereo-video analysis */

== Introductory points for stereo-video analysis ==
Our ongoing stereo-DOV campaign at Darwin and Wolf islands cover a total of 15 sites across these two islands: 7 sites at Darwin and 8 sites at Wolf island. Figure 1 shows the location, site names and coordinates for the starting point for each dive.

[[Archivo:Fig1a_Darwin.tif]]
[[Archivo:Fig1b_Wolf.tif]]
Figure 1 – Location of stereo-BRUVs deployments (diamonds) and stereo-DOVs transects (lines) at Darwin (top) and Wolf (bottom) islands. Coordinates given in decimal degrees (CRS: WGS84).

Before training is started, every analyst must have a Google Drive account. Working spreadsheets will be shared through this platform to ensure all parties analysing the same stereo-DOVs campaign have access to the same document. This will prevent the creation of multiple versions of the same document.
Ensure camera systems have been calibrated prior to the video analysis (See Section 4 - Calibration of camera systems for more information). If cameras were changed in a stereo-DOV system, it will be necessary to recalibrate the system before any videos can be analysed.
• Video analysts must be thoroughly trained by a senior team member in the correct use of EventMeasure and/or fish identification. After the initial training period, the new video analyst will have two (2) weeks to examine a ‘testing video’ on their own. This ‘testing video’ is any video that has been previously analysed and checked for accuracy by a senior member of our team. To be deemed competent, analysts must obtain a minimum of 90% accuracy in the identification of species present in the ‘testing video’.
• After training is completed, it is expected the analysis will take between 3-4 days per video.
• For stereo-DOVs, fish are divided into four (4) categories, each is treated slightly differently during the analysis phase. This will be explained with more detail under Section 5 - Analysing stereo-DOV.
o Spp of interest - large carnivorous species
o Spp of NO interest - small herbivorous species
o Schools - aggregations of more than 20 individuals of the same species
o Gringos (Paranthias colonus)
• Every video must be analysed by at least two analysts, one will identify the fish and a second person will measure individual fishes and confirm fish identifications.
• There is one working spreadsheet called DOVs Progress Sheet for each sampling campaign (Figure 2). Notice the columns in the spreadsheet have been colour coded to match this protocol. You will notice that you will not be able to edit some sheets and/or columns in this spreadsheet. This is because there is either a formula that automatically calculates values or there is reference information that will remain the same throughout this study. The DOVs Progress Sheet has six (6) sheets or tabs:
1. FieldDB – sheet containing information gathered while on the field;
2. progr1-Interest-School-Gring – it contains information about the overall progress for the analysis of species of interest, schooling fish, and gringos;
3. progr2- non Interest – it only contains information for species of no interest to this project;
4. Disease sharks – sheet used to keep track of the sites where hammerheads show signs of having a skin disease (Figure 3).
5. spp – this sheet contains two lists:
a. INTEREST SPP – list containing the fish families of interest for this study
b. NON INTEREST – list containing the fish families that are not of interest to this project
6. Max Lngths for Cmm Sp – maximum lengths for the most common species found at Darwin and Wolf islands. This information is useful for the Quality Control (see Quality control section).
• Videos, calibration (CAL) files, spreadsheets, manuals and all relevant documentation will be available on the server. If you do not have access to the server, ask the team leader.

[[Archivo:Fig2.jpg | 400px | Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.]]
Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.

[[Archivo:Fig3.tif]]
Figure 3 – Examples of skin disease in hammerhead sharks that must be recorded in the ‘Disease sharks’ tab of the Progress Sheet.

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T23:08:13Z

Lidefi87: /* Introductory points for stereo-video analysis */

== Introductory points for stereo-video analysis ==
Our ongoing stereo-DOV campaign at Darwin and Wolf islands cover a total of 15 sites across these two islands: 7 sites at Darwin and 8 sites at Wolf island. Figure 1 shows the location, site names and coordinates for the starting point for each dive.

[[Archivo:Fig1a_Darwin.tif]]
[[Archivo:Fig1b_Wolf.tif]]
Figure 1 – Location of stereo-BRUVs deployments (diamonds) and stereo-DOVs transects (lines) at Darwin (top) and Wolf (bottom) islands. Coordinates given in decimal degrees (CRS: WGS84).

Before training is started, every analyst must have a Google Drive account. Working spreadsheets will be shared through this platform to ensure all parties analysing the same stereo-DOVs campaign have access to the same document. This will prevent the creation of multiple versions of the same document.
Ensure camera systems have been calibrated prior to the video analysis (See Section 4 - Calibration of camera systems for more information). If cameras were changed in a stereo-DOV system, it will be necessary to recalibrate the system before any videos can be analysed.
• Video analysts must be thoroughly trained by a senior team member in the correct use of EventMeasure and/or fish identification. After the initial training period, the new video analyst will have two (2) weeks to examine a ‘testing video’ on their own. This ‘testing video’ is any video that has been previously analysed and checked for accuracy by a senior member of our team. To be deemed competent, analysts must obtain a minimum of 90% accuracy in the identification of species present in the ‘testing video’.
• After training is completed, it is expected the analysis will take between 3-4 days per video.
• For stereo-DOVs, fish are divided into four (4) categories, each is treated slightly differently during the analysis phase. This will be explained with more detail under Section 5 - Analysing stereo-DOV.
o Spp of interest - large carnivorous species
o Spp of NO interest - small herbivorous species
o Schools - aggregations of more than 20 individuals of the same species
o Gringos (Paranthias colonus)
• Every video must be analysed by at least two analysts, one will identify the fish and a second person will measure individual fishes and confirm fish identifications.
• There is one working spreadsheet called DOVs Progress Sheet for each sampling campaign (Figure 2). Notice the columns in the spreadsheet have been colour coded to match this protocol. You will notice that you will not be able to edit some sheets and/or columns in this spreadsheet. This is because there is either a formula that automatically calculates values or there is reference information that will remain the same throughout this study. The DOVs Progress Sheet has six (6) sheets or tabs:
1. FieldDB – sheet containing information gathered while on the field;
2. progr1-Interest-School-Gring – it contains information about the overall progress for the analysis of species of interest, schooling fish, and gringos;
3. progr2- non Interest – it only contains information for species of no interest to this project;
4. Disease sharks – sheet used to keep track of the sites where hammerheads show signs of having a skin disease (Figure 3).
5. spp – this sheet contains two lists:
a. INTEREST SPP – list containing the fish families of interest for this study
b. NON INTEREST – list containing the fish families that are not of interest to this project
6. Max Lngths for Cmm Sp – maximum lengths for the most common species found at Darwin and Wolf islands. This information is useful for the Quality Control (see Quality control section).
• Videos, calibration (CAL) files, spreadsheets, manuals and all relevant documentation will be available on the server. If you do not have access to the server, ask the team leader.

[[Archivo:Fig2.jpg | 400pp | Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.]]
Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.

[[Archivo:Fig3.tif]]
Figure 3 – Examples of skin disease in hammerhead sharks that must be recorded in the ‘Disease sharks’ tab of the Progress Sheet.

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T23:07:45Z

Lidefi87: /* Introductory points for stereo-video analysis */

== Introductory points for stereo-video analysis ==
Our ongoing stereo-DOV campaign at Darwin and Wolf islands cover a total of 15 sites across these two islands: 7 sites at Darwin and 8 sites at Wolf island. Figure 1 shows the location, site names and coordinates for the starting point for each dive.

[[Archivo:Fig1a_Darwin.tif]]
[[Archivo:Fig1b_Wolf.tif]]
Figure 1 – Location of stereo-BRUVs deployments (diamonds) and stereo-DOVs transects (lines) at Darwin (top) and Wolf (bottom) islands. Coordinates given in decimal degrees (CRS: WGS84).

Before training is started, every analyst must have a Google Drive account. Working spreadsheets will be shared through this platform to ensure all parties analysing the same stereo-DOVs campaign have access to the same document. This will prevent the creation of multiple versions of the same document.
Ensure camera systems have been calibrated prior to the video analysis (See Section 4 - Calibration of camera systems for more information). If cameras were changed in a stereo-DOV system, it will be necessary to recalibrate the system before any videos can be analysed.
• Video analysts must be thoroughly trained by a senior team member in the correct use of EventMeasure and/or fish identification. After the initial training period, the new video analyst will have two (2) weeks to examine a ‘testing video’ on their own. This ‘testing video’ is any video that has been previously analysed and checked for accuracy by a senior member of our team. To be deemed competent, analysts must obtain a minimum of 90% accuracy in the identification of species present in the ‘testing video’.
• After training is completed, it is expected the analysis will take between 3-4 days per video.
• For stereo-DOVs, fish are divided into four (4) categories, each is treated slightly differently during the analysis phase. This will be explained with more detail under Section 5 - Analysing stereo-DOV.
o Spp of interest - large carnivorous species
o Spp of NO interest - small herbivorous species
o Schools - aggregations of more than 20 individuals of the same species
o Gringos (Paranthias colonus)
• Every video must be analysed by at least two analysts, one will identify the fish and a second person will measure individual fishes and confirm fish identifications.
• There is one working spreadsheet called DOVs Progress Sheet for each sampling campaign (Figure 2). Notice the columns in the spreadsheet have been colour coded to match this protocol. You will notice that you will not be able to edit some sheets and/or columns in this spreadsheet. This is because there is either a formula that automatically calculates values or there is reference information that will remain the same throughout this study. The DOVs Progress Sheet has six (6) sheets or tabs:
1. FieldDB – sheet containing information gathered while on the field;
2. progr1-Interest-School-Gring – it contains information about the overall progress for the analysis of species of interest, schooling fish, and gringos;
3. progr2- non Interest – it only contains information for species of no interest to this project;
4. Disease sharks – sheet used to keep track of the sites where hammerheads show signs of having a skin disease (Figure 3).
5. spp – this sheet contains two lists:
a. INTEREST SPP – list containing the fish families of interest for this study
b. NON INTEREST – list containing the fish families that are not of interest to this project
6. Max Lngths for Cmm Sp – maximum lengths for the most common species found at Darwin and Wolf islands. This information is useful for the Quality Control (see Quality control section).
• Videos, calibration (CAL) files, spreadsheets, manuals and all relevant documentation will be available on the server. If you do not have access to the server, ask the team leader.

[[Archivo:Fig2.jpg | Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.]]
Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.

[[Archivo:Fig3.tif]]
Figure 3 – Examples of skin disease in hammerhead sharks that must be recorded in the ‘Disease sharks’ tab of the Progress Sheet.

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Archivo:Fig2.jpg

2019-08-20T23:06:48Z

Lidefi87: Lidefi87 subió una nueva versión de Archivo:Fig2.jpg

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T23:04:51Z

Lidefi87: /* Introductory points for stereo-video analysis */

== Introductory points for stereo-video analysis ==
• Our ongoing stereo-DOV campaign at Darwin and Wolf islands cover a total of 15 sites across these two islands: 7 sites at Darwin and 8 sites at Wolf island. Figure 1 shows the location, site names and coordinates for the starting point for each dive.

[[Archivo:Fig1a_Darwin.tif]]
[[Archivo:Fig1b_Wolf.tif]]
Figure 1 – Location of stereo-BRUVs deployments (diamonds) and stereo-DOVs transects (lines) at Darwin (top) and Wolf (bottom) islands. Coordinates given in decimal degrees (CRS: WGS84).

• Before training is started, every analyst must have a Google Drive account. Working spreadsheets will be shared through this platform to ensure all parties analysing the same stereo-DOVs campaign have access to the same document. This will prevent the creation of multiple versions of the same document.
• Ensure camera systems have been calibrated prior to the video analysis (See Section 4 - Calibration of camera systems for more information). If cameras were changed in a stereo-DOV system, it will be necessary to recalibrate the system before any videos can be analysed.
• Video analysts must be thoroughly trained by a senior team member in the correct use of EventMeasure and/or fish identification. After the initial training period, the new video analyst will have two (2) weeks to examine a ‘testing video’ on their own. This ‘testing video’ is any video that has been previously analysed and checked for accuracy by a senior member of our team. To be deemed competent, analysts must obtain a minimum of 90% accuracy in the identification of species present in the ‘testing video’.
• After training is completed, it is expected the analysis will take between 3-4 days per video.
• For stereo-DOVs, fish are divided into four (4) categories, each is treated slightly differently during the analysis phase. This will be explained with more detail under Section 5 - Analysing stereo-DOV.
o Spp of interest - large carnivorous species
o Spp of NO interest - small herbivorous species
o Schools - aggregations of more than 20 individuals of the same species
o Gringos (Paranthias colonus)
• Every video must be analysed by at least two analysts, one will identify the fish and a second person will measure individual fishes and confirm fish identifications.
• There is one working spreadsheet called DOVs Progress Sheet for each sampling campaign (Figure 2). Notice the columns in the spreadsheet have been colour coded to match this protocol. You will notice that you will not be able to edit some sheets and/or columns in this spreadsheet. This is because there is either a formula that automatically calculates values or there is reference information that will remain the same throughout this study. The DOVs Progress Sheet has six (6) sheets or tabs:
1. FieldDB – sheet containing information gathered while on the field;
2. progr1-Interest-School-Gring – it contains information about the overall progress for the analysis of species of interest, schooling fish, and gringos;
3. progr2- non Interest – it only contains information for species of no interest to this project;
4. Disease sharks – sheet used to keep track of the sites where hammerheads show signs of having a skin disease (Figure 3).
5. spp – this sheet contains two lists:
a. INTEREST SPP – list containing the fish families of interest for this study
b. NON INTEREST – list containing the fish families that are not of interest to this project
6. Max Lngths for Cmm Sp – maximum lengths for the most common species found at Darwin and Wolf islands. This information is useful for the Quality Control (see Quality control section).
• Videos, calibration (CAL) files, spreadsheets, manuals and all relevant documentation will be available on the server. If you do not have access to the server, ask the team leader.

[[Archivo:Fig2.jpg | Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.]]

[[Archivo:Fig3.tif]]
Figure 3 – Examples of skin disease in hammerhead sharks that must be recorded in the ‘Disease sharks’ tab of the Progress Sheet.

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Archivo:Fig2.jpg

2019-08-20T23:03:58Z

Lidefi87:

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T23:03:44Z

Lidefi87: /* Introductory points for stereo-video analysis */

== Introductory points for stereo-video analysis ==
• Our ongoing stereo-DOV campaign at Darwin and Wolf islands cover a total of 15 sites across these two islands: 7 sites at Darwin and 8 sites at Wolf island. Figure 1 shows the location, site names and coordinates for the starting point for each dive.

[[Archivo:Fig1a_Darwin.tif]]
[[Archivo:Fig1b_Wolf.tif]]
Figure 1 – Location of stereo-BRUVs deployments (diamonds) and stereo-DOVs transects (lines) at Darwin (top) and Wolf (bottom) islands. Coordinates given in decimal degrees (CRS: WGS84).

• Before training is started, every analyst must have a Google Drive account. Working spreadsheets will be shared through this platform to ensure all parties analysing the same stereo-DOVs campaign have access to the same document. This will prevent the creation of multiple versions of the same document.
• Ensure camera systems have been calibrated prior to the video analysis (See Section 4 - Calibration of camera systems for more information). If cameras were changed in a stereo-DOV system, it will be necessary to recalibrate the system before any videos can be analysed.
• Video analysts must be thoroughly trained by a senior team member in the correct use of EventMeasure and/or fish identification. After the initial training period, the new video analyst will have two (2) weeks to examine a ‘testing video’ on their own. This ‘testing video’ is any video that has been previously analysed and checked for accuracy by a senior member of our team. To be deemed competent, analysts must obtain a minimum of 90% accuracy in the identification of species present in the ‘testing video’.
• After training is completed, it is expected the analysis will take between 3-4 days per video.
• For stereo-DOVs, fish are divided into four (4) categories, each is treated slightly differently during the analysis phase. This will be explained with more detail under Section 5 - Analysing stereo-DOV.
o Spp of interest - large carnivorous species
o Spp of NO interest - small herbivorous species
o Schools - aggregations of more than 20 individuals of the same species
o Gringos (Paranthias colonus)
• Every video must be analysed by at least two analysts, one will identify the fish and a second person will measure individual fishes and confirm fish identifications.
• There is one working spreadsheet called DOVs Progress Sheet for each sampling campaign (Figure 2). Notice the columns in the spreadsheet have been colour coded to match this protocol. You will notice that you will not be able to edit some sheets and/or columns in this spreadsheet. This is because there is either a formula that automatically calculates values or there is reference information that will remain the same throughout this study. The DOVs Progress Sheet has six (6) sheets or tabs:
1. FieldDB – sheet containing information gathered while on the field;
2. progr1-Interest-School-Gring – it contains information about the overall progress for the analysis of species of interest, schooling fish, and gringos;
3. progr2- non Interest – it only contains information for species of no interest to this project;
4. Disease sharks – sheet used to keep track of the sites where hammerheads show signs of having a skin disease (Figure 3).
5. spp – this sheet contains two lists:
a. INTEREST SPP – list containing the fish families of interest for this study
b. NON INTEREST – list containing the fish families that are not of interest to this project
6. Max Lngths for Cmm Sp – maximum lengths for the most common species found at Darwin and Wolf islands. This information is useful for the Quality Control (see Quality control section).
• Videos, calibration (CAL) files, spreadsheets, manuals and all relevant documentation will be available on the server. If you do not have access to the server, ask the team leader.

[[Archivo:Fig2.jpg]]
Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.

[[Archivo:Fig3.tif]]
Figure 3 – Examples of skin disease in hammerhead sharks that must be recorded in the ‘Disease sharks’ tab of the Progress Sheet.

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T23:01:16Z

Lidefi87: /* Introductory points for stereo-video analysis */

== Introductory points for stereo-video analysis ==
• Our ongoing stereo-DOV campaign at Darwin and Wolf islands cover a total of 15 sites across these two islands: 7 sites at Darwin and 8 sites at Wolf island. Figure 1 shows the location, site names and coordinates for the starting point for each dive.

[[Archivo:Fig1a_Darwin.tif]]
[[Archivo:Fig1b_Wolf.tif]]
Figure 1 – Location of stereo-BRUVs deployments (diamonds) and stereo-DOVs transects (lines) at Darwin (top) and Wolf (bottom) islands. Coordinates given in decimal degrees (CRS: WGS84).

• Before training is started, every analyst must have a Google Drive account. Working spreadsheets will be shared through this platform to ensure all parties analysing the same stereo-DOVs campaign have access to the same document. This will prevent the creation of multiple versions of the same document.
• Ensure camera systems have been calibrated prior to the video analysis (See Section 4 - Calibration of camera systems for more information). If cameras were changed in a stereo-DOV system, it will be necessary to recalibrate the system before any videos can be analysed.
• Video analysts must be thoroughly trained by a senior team member in the correct use of EventMeasure and/or fish identification. After the initial training period, the new video analyst will have two (2) weeks to examine a ‘testing video’ on their own. This ‘testing video’ is any video that has been previously analysed and checked for accuracy by a senior member of our team. To be deemed competent, analysts must obtain a minimum of 90% accuracy in the identification of species present in the ‘testing video’.
• After training is completed, it is expected the analysis will take between 3-4 days per video.
• For stereo-DOVs, fish are divided into four (4) categories, each is treated slightly differently during the analysis phase. This will be explained with more detail under Section 5 - Analysing stereo-DOV.
o Spp of interest - large carnivorous species
o Spp of NO interest - small herbivorous species
o Schools - aggregations of more than 20 individuals of the same species
o Gringos (Paranthias colonus)
• Every video must be analysed by at least two analysts, one will identify the fish and a second person will measure individual fishes and confirm fish identifications.
• There is one working spreadsheet called DOVs Progress Sheet for each sampling campaign (Figure 2). Notice the columns in the spreadsheet have been colour coded to match this protocol. You will notice that you will not be able to edit some sheets and/or columns in this spreadsheet. This is because there is either a formula that automatically calculates values or there is reference information that will remain the same throughout this study. The DOVs Progress Sheet has six (6) sheets or tabs:
1. FieldDB – sheet containing information gathered while on the field;
2. progr1-Interest-School-Gring – it contains information about the overall progress for the analysis of species of interest, schooling fish, and gringos;
3. progr2- non Interest – it only contains information for species of no interest to this project;
4. Disease sharks – sheet used to keep track of the sites where hammerheads show signs of having a skin disease (Figure 3).
5. spp – this sheet contains two lists:
a. INTEREST SPP – list containing the fish families of interest for this study
b. NON INTEREST – list containing the fish families that are not of interest to this project
6. Max Lngths for Cmm Sp – maximum lengths for the most common species found at Darwin and Wolf islands. This information is useful for the Quality Control (see Quality control section).
• Videos, calibration (CAL) files, spreadsheets, manuals and all relevant documentation will be available on the server. If you do not have access to the server, ask the team leader.

[[Archivo:Fig2.tif]]
Figure 2 – Progress sheet example. Notice the spreadsheet has the six (6) tabs or sheets described in text.

[[Archivo:Fig3.tif]]
Figure 3 – Examples of skin disease in hammerhead sharks that must be recorded in the ‘Disease sharks’ tab of the Progress Sheet.

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T22:55:55Z

Lidefi87: /* = Folder structure and naming conventions */

== Introductory points for stereo-video analysis ==

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ===
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Análisis estéreo videos - DOVs and BRUVs

2019-08-20T22:55:34Z

Lidefi87: Página creada con « == Introductory points for stereo-video analysis == == Data management - How to store data correctly == === Folder structure and naming conventions == ==== Calibration fo...»

== Introductory points for stereo-video analysis ==

== Data management - How to store data correctly ==
=== Folder structure and naming conventions ==
==== Calibration folder ====
==== Island folders - Darwin and Wolf ====
===== DOVs folder =====
===== BRUVs folder =====
==== Supporting data folder ====

== Converting stereo-videos using Xilisoft Video Converter ==
=== Installing or renewing Xilisoft licence in your computer ===
=== Creating a stereo-video profile ===
=== Load and convert video files ===
=== Common errors to avoid while using Xilisoft ===

== Calibration of camera systems ==
=== Calibrating stereo-video sets ===
==== Checklist to organise calibrations ====
=== Analysing calibration videos using CAL software (Quick guide) ===
==== Making point measurements ====
==== Starting a new project ====
==== Loading videos and synchronising ====
==== Setting adjustments ====
==== Generating stereo camera files ====
==== Saving results ====
=== Checking calibrations ===
=== Recording calibrations completed in the log ===
=== Troubleshooting for CAL ===

== Analysing stereo-DOVs videos ==
=== Loading videos into EventMeasure ===
==== Converted videos ====
==== Unconverted videos ====
=== Editing information fields and the species list ===
=== Loading calibration files ===
=== Saving an EMObs file for current analysis ===
=== Setting up video analysis periods ===
=== Useful sources to aid in fish identification ===
=== Species of interest – large carnivorous fish ===
==== Identifying and counting individuals of interest ====
==== Measuring individuals of interest ====
=== Large schools of fish (20 individuals or more) ===
=== Non-interest species – herbivorous fish ===
==== Identifying and counting individuals of no interest ====
==== Measuring individuals of no interest ====
=== Gringos (Paranthias colonus) ===
==== Downloading GPS data and calculating distance in Basecamp ====
==== Analysing Gringo data – Counting individuals ====
==== Analysing Gringo data – Measuring individuals ====
=== Last steps - Checking your work ===
=== Quality control process ===
=== Tips and shortcut keys in EM ===

== Renewing EventMeasure licenses ==
=== USB keys ===
=== Software keys ===

== General troubleshooting in EM ==
=== One video is shorter than the other ===
=== Videos could not be converted and they are in MP4 format, but EM cannot read them ===
=== An EMObs file is opened in EM, but when attempting to review a point in the Data window an error window appears ===
=== EM is not recognizing the license key ===

== Maintenance of gear used in stereo-video sampling ==
=== Materials needed for maintenance ===
=== GoBenthic housings maintenance ===
=== SeaGIS housing maintenance ===
=== Metal tools ===
=== Car battery and winch connections ===
=== SCUBA gear ===

Proyecto Tiburones

2019-08-20T22:44:51Z

Lidefi87: /* Protocolos de trabajo */

Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.
Repository for supporting documents to all studies by the Sharks Project at the CDF.

==Protocolos de trabajo==
*[[medio:ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]
*[[Análisis estéreo videos - DOVs and BRUVs]]

==Archivos de soporte - Análisis estéreo-videos==
*[[medio:DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[medio:NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R Código resumen de datos DOVs / Summarising DOVs data script]

==Archivos de soporte - Marcaje de tiburones==
*[[medio:SlewiniSamplingTaggingDarwin.xlsx |Formato marcaje tiburones martillo / Hammerheads tagging and sampling log]]

Proyecto Tiburones

2019-08-20T22:43:22Z

Lidefi87:

Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.
Repository for supporting documents to all studies by the Sharks Project at the CDF.

==Protocolos de trabajo==
*[[medio:ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]

==Archivos de soporte - Análisis estéreo-videos==
*[[medio:DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[medio:NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R Código resumen de datos DOVs / Summarising DOVs data script]

==Archivos de soporte - Marcaje de tiburones==
*[[medio:SlewiniSamplingTaggingDarwin.xlsx |Formato marcaje tiburones martillo / Hammerheads tagging and sampling log]]

Proyecto Tiburones

2019-08-20T22:43:07Z

Lidefi87: /* Archivos de soporte - Análisis estéreo-videos */

Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.
Repository for supporting documents to all studies by the Sharks Project at the CDF.

==Protocolos de trabajo==
*[[medio:ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]

==Archivos de soporte - Análisis estéreo-videos==
*[[medio:DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[medio:NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R | Código resumen de datos DOVs / Summarising DOVs data script]

==Archivos de soporte - Marcaje de tiburones==
*[[medio:SlewiniSamplingTaggingDarwin.xlsx |Formato marcaje tiburones martillo / Hammerheads tagging and sampling log]]

Proyecto Tiburones

2019-08-20T22:42:42Z

Lidefi87: /* Archivos de soporte - Análisis estéreo-videos */

Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.
Repository for supporting documents to all studies by the Sharks Project at the CDF.

==Protocolos de trabajo==
*[[medio:ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]

==Archivos de soporte - Análisis estéreo-videos==
*[[medio:DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[medio:NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R |Código resumen de datos DOVs / Summarising DOVs data script]

==Archivos de soporte - Marcaje de tiburones==
*[[medio:SlewiniSamplingTaggingDarwin.xlsx |Formato marcaje tiburones martillo / Hammerheads tagging and sampling log]]

Proyecto Tiburones

2019-08-20T21:45:59Z

Lidefi87:

Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.
Repository for supporting documents to all studies by the Sharks Project at the CDF.

==Protocolos de trabajo==
*[[medio:ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]

==Archivos de soporte - Análisis estéreo-videos==
*[[medio:DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[medio:NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[[medio:SummarisingDOVsData.R |Código resumen de datos DOVs / Summarising DOVs data script]]

==Archivos de soporte - Marcaje de tiburones==
*[[medio:SlewiniSamplingTaggingDarwin.xlsx |Formato marcaje tiburones martillo / Hammerheads tagging and sampling log]]

SummarisingDOVsData.R

2019-08-20T21:08:37Z

Lidefi87:

[[[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R | Script to summarise DOVs data]]]

SummarisingDOVsData.R

2019-08-20T21:07:50Z

Lidefi87: Página creada con «[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R]»

[[[https://github.com/lidefi87/FCD_R_code/blob/master/SummarisingDOVsData.R]]]

NonInterestFamilyList.csv

2019-08-20T20:49:43Z

Lidefi87: Página creada con «Medio:NonInterestFamilyList.csv»

[[Medio:NonInterestFamilyList.csv]]

Archivo:DOVsProgressSheetTemplate.xlsx

2019-08-20T20:49:19Z

Lidefi87:

DOVsProgressSheetTemplate.xlsx

2019-08-20T20:49:10Z

Lidefi87: Página creada con «Medio:DOVsProgressSheetTemplate.xlsx»

[[Medio:DOVsProgressSheetTemplate.xlsx]]

Proyecto Tiburones

2019-08-20T20:48:54Z

Lidefi87:

Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.

==Protocolos de trabajo==
*[[ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs / DOVs analysis protocol]]

==Archivos de soporte - Análisis de DOVs==
*[[DOVsProgressSheetTemplate.xlsx |Formato de Progreso de Análisis de DOVs / DOVs Progress Sheet Template]]
*[[NonInterestFamilyList.csv |Lista de Familias de poco interés / No-interest Family list]]
*[[SummarisingDOVsData.R |Código resumen de datos DOVs / Summarising DOVs data script]]

Archivo:ProtocolForDOVsAnalysis 2019 DFA.pdf

2019-08-20T20:42:11Z

Lidefi87:

ProtocolForDOVsAnalysis 2019 DFA.pdf

2019-08-20T20:41:04Z

Lidefi87: Página creada con «Medio:ProtocolForDOVsAnalysis_2019_DFA.pdf»

[[Medio:ProtocolForDOVsAnalysis_2019_DFA.pdf]]

Proyecto Tiburones

2019-08-20T20:40:51Z

Lidefi87:

Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.

==Protocolos de trabajo==
*[[ProtocolForDOVsAnalysis_2019_DFA.pdf |Protocolo de análisis de videos estéreo DOVs]]

ProtocolForDOVsAnalysis 2019 DFA.docx

2019-08-20T20:38:53Z

Lidefi87: Página creada con «Medio:ProtocolForDOVsAnalysis_2019_DFA.docx»

[[Medio:ProtocolForDOVsAnalysis_2019_DFA.docx]]

Proyecto Tiburones

2019-08-20T20:38:18Z

Lidefi87:

Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.

==Protocolos de trabajo==
*[[ProtocolForDOVsAnalysis_2019_DFA.docx |Protocolo de análisis de videos estéreo DOVs]]

Proyecto Tiburones

2019-08-20T20:36:04Z

Lidefi87: Página creada con «Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.»

Repositorio de documentos de soporte del Proyecto Tiburones de la FCD.